MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Escherichia coli
19428wD4_HM13
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 110
bases: 5,033,648 bps
CDS: 4,645
rRNA: 10
Repeat region:
tmRNA: 1
tRNA: 79
misc RNA:
Total features: 4,735
Total number of protein coding genes annotated/found:
4,645
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Items 1 - 20
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA)
Range ^
Gene Product Name
SEQF5033|JADGMH010000022.1
SEQF5033_01820
Genome Viewer
NA
AA
9870/3290
35733-45602
tRNA nuclease CdiA
SEQF5033|JADGMH010000019.1
SEQF5033_01058
Genome Viewer
NA
AA
9621/3207
52073-42453
D-alanine--D-alanyl carrier protein ligase
SEQF5033|JADGMH010000025.1
SEQF5033_01973
Genome Viewer
NA
AA
9492/3164
22179-31670
2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase%2C mitochondrial
SEQF5033|JADGMH010000011.1
SEQF5033_00191
Genome Viewer
NA
AA
8052/2684
59463-51412
hypothetical protein
SEQF5033|JADGMH010000007.1
SEQF5033_04292
Genome Viewer
NA
AA
7554/2518
231177-223624
tRNA nuclease CdiA
SEQF5033|JADGMH010000019.1
SEQF5033_01050
Genome Viewer
NA
AA
6501/2167
28286-21786
Tyrocidine synthase 3
SEQF5033|JADGMH010000019.1
SEQF5033_01049
Genome Viewer
NA
AA
6465/2155
21775-15311
D-alanine--D-alanyl carrier protein ligase
SEQF5033|JADGMH010000025.1
SEQF5033_01972
Genome Viewer
NA
AA
6108/2036
15984-22091
D-alanine--D-alanyl carrier protein ligase
SEQF5033|JADGMH010000024.1
SEQF5033_01913
Genome Viewer
NA
AA
4983/1661
24-5006
hypothetical protein
SEQF5033|JADGMH010000011.1
SEQF5033_00204
Genome Viewer
NA
AA
4962/1654
79677-74716
Alpha-2-macroglobulin
SEQF5033|JADGMH010000019.1
SEQF5033_01052
Genome Viewer
NA
AA
4797/1599
36208-31412
Gramicidin S synthase 2
SEQF5033|JADGMH010000013.1
SEQF5033_00485
Genome Viewer
NA
AA
4740/1580
99341-104080
Autotransporter adhesin UpaG
SEQF5033|JADGMH010000017.1
SEQF5033_00856
Genome Viewer
NA
AA
4557/1519
19228-14672
hypothetical protein
SEQF5033|JADGMH010000008.1
SEQF5033_04487
Genome Viewer
NA
AA
4554/1518
162695-167248
Glutamate synthase [NADPH] large chain
SEQF5033|JADGMH010000010.1
SEQF5033_00060
Genome Viewer
NA
AA
4461/1487
75474-79934
Chromosome partition protein MukB
SEQF5033|JADGMH010000002.1
SEQF5033_02326
Genome Viewer
NA
AA
4395/1465
220870-216476
hypothetical protein
SEQF5033|JADGMH010000019.1
SEQF5033_01046
Genome Viewer
NA
AA
4368/1456
12357-7990
Surfactin synthase subunit 1
SEQF5033|JADGMH010000001.1
SEQF5033_01239
Genome Viewer
NA
AA
4251/1417
120612-124862
hypothetical protein
SEQF5033|JADGMH010000029.1
SEQF5033_02129
Genome Viewer
NA
AA
4224/1408
21673-17450
DNA-directed RNA polymerase subunit beta'
SEQF5033|JADGMH010000001.1
SEQF5033_01221
Genome Viewer
NA
AA
4131/1377
100906-96776
Hemoglobin-binding protease hbp autotransporter
Items 1 - 20
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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